Compare what the disk claims against what was observed
endpoint-agent-inventory.json records, for each file, the moment the agent first observed it. Join the two sources on path and compare the claimed creation time with the first-observed time. For legitimate files these are consistent. For exactly one file they are years apart, and in the direction that matters: the agent has been reporting since long before the file claims to have been created, yet only saw it recently. Record its full path, the date it claims, and the date it was actually observed.